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Annals of Applied Statistics
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Volume 1, Number 1 (2007)
Volume 1, Number 2 (2007)
Volume 2, Number 1 (2008)
Volume 2, Number 2 (2008)
Volume 2, Number 3 (2008)
Volume 2, Number 4 (2008)
Volume 3, Number 1 (2009)
Volume 3, Number 2 (2009)
Volume 3, Number 3 (2009)
Volume 3, Number 4 (2009)
Volume 4, Number 1 (2010)
Volume 4, Number 2 (2010)
Volume 4, Number 3 (2010)
Volume 4, Number 4 (2010)
Volume 5, Number 1 (2011)
Volume 5, Number 2a (2011)
Volume 5, Number 2b (2011)
Volume 5, Number 3 (2011)
Volume 5, Number 4 (2011)
Future Issues
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Supplements

Future Issues

A General Formulation for Standardization of Rates as a Method to Control Confounding by Measured and Unmeasured Disease Risk Factors
[Supplementary Material] [Article]
Steven David Mark

A Simple Forward Selection Procedure Based on False Discovery Rate Control
[Supplementary Material] [Article]
Yoav Benjamini, and Yulia Gavrilov

Hidden Markov Models for Alcoholism Treatment Trial Data
[Supplementary Material] [Article]
Kenneth E Shirley, Dylan Small, Kevin Lynch, Stephen Maisto, and David Oslin

Intoducing the Discussion Paper by Székely and Rizzo
[Supplementary Material] [Article]
Michael A. Newton

Nonparametric Bayesian multiple testing for longitudinal performance stratification
[Supplementary Material] [Article]
James G Scott

Non-Parametric Tests of Structure for High Angular Resolution Diffusion Imaging in Q-Space
[Supplementary Material] [Article]
Sofia C. Olhede and Brandon Whitcher

Nonparametric Bayesian Sparse Factor Models with application to Gene Expression modelling
[Supplementary Material] [Article]
David Arthur Knowles and Zoubin Ghahramani

A New Multivariate Measurement Error Model with Zero-Inflated Dietary Data, and its Application to Dietary Assessment
[Supplementary Material] [Article]
Saijuan Zhang, Douglas Midthune, Patricia M. Guenther, Susan M. Krebs-Smith, Victor Kipnis, Kevin W. Dodd, Dennis W. Buckman, Janet A. Tooze, Laurence S. Freedman, and Raymond J. Carroll

Degradation Modeling Applied to Residual Lifetime Prediction using Functional Data Analysis
[Supplementary Material] [Article]
Rensheng Roger Zhou, Nicoleta Serban, and Nagi Gebraeel

A hierarchical Bayesian approach to Record Linkage and size population problems
[Supplementary Material] [Article]
Andrea Tancredi and Brunero Liseo

Causal Inference in Transportation Safety Studies: Comparison of Potential Outcomes and Causal Diagrams
[Supplementary Material] [Article]
Vishesh Karwa, Aleksandra B. Slavkovic, and Eric T. Donnell

Forecasting Emergency Medical Service Call Arrival Rates
[Supplementary Material] [Article]
David Scott Matteson, Mathew W. McLean, Dawn B. Woodard, and Shane G. Henderson

Nonparametric Models for Peak Identification in MALDI-TOF Mass Spectroscopy
[Supplementary Material] [Article]
Merlise A Clyde, Leanna L House, and Robert Lee Wolpert

A New Multivariate Measurement Error Model with Zero-Inflated Dietary Data, and its Application to Dietary Assessment
[Supplementary Material] [Article]
Saijuan Zhang, Douglas Midthune, Patricia M. Guenther, Susan M. Krebs-Smith, Victor Kipnis, Kevin W. Dodd, Dennis W. Buckman, Janet A. Tooze, Laurence S. Freedman, and Raymond J. Carroll

A Nonstationary Nonparametric Bayesian Approach To Dynamically Modeling Effective Connectivity in functional Magnetic Resonance Imaging Experiments
[Supplementary Material] [Article]
Sourabh Bhattacharya and Ranjan Maitra

Two-stage Empirical Likelihood for Longitudinal Neuroimaging Data
[Supplementary Material] [Article]
Xiaoyan Shi, Joseph G Ibrahim, Jeffrey Lieberman, Martin Styner, and Hongtu Zhu

A Bayesian measurement error model for two-channel cell-based RNAi data with replicates
[Supplementary Material] [Article]
Chung-Hsing Chen, Wen-Chi Su, Chih-Yu Chen, Jing-Ying Huang, Fang-Yu Tsai, Wen-Chang Wang, Chao Agnes Hsiung, King-Song Jeng, and I-Shou Chang

Measuring the Vulnerability of the Uruguayan Population to Vector-borne Diseases Via Spatially Hierarchical Factor Models
[Supplementary Material] [Article]
Hedibert Freitas Lopes, Alexandra Mello Schmidt, ESther Salazar, Mariana Mariana Gomez, and Marcel Achkar

A Stochastic Algorithm for Probabilistic Independent Component Analysis
[Supplementary Material] [Article]
Stephanie Maureen Allassonniere and Laurent Younes

Bayesian Joint Modeling of Multiple Gene Networks and Diverse Genomic Data to Identify Target Genes of a Transcription Factor
[Supplementary Material] [Article]
Peng Wei and Wei Pan

Estimation and extrapolation of time trends in registry data - Borrowing strength from related populations
[Supplementary Material] [Article]
Andrea Riebler, Leonhard Held, and Håvard Rue

Estimating Within-School Contact Networks to Understand Influenza Transmission
[Supplementary Material] [Article]
Gail Elizabeth Potter, Mark S. Handcock, Ira M. Longini, Jr., and M. Elizabeth Halloran

Multiple Imputation for Sharing Precise Geographies in Public Use Data
[Supplementary Material] [Article]
Hao Wang and Jerome P. Reiter

Optimal Pricing Using Online Auction Experiments: A Polya Tree Approach
[Supplementary Material] [Article]
Edward I. George and Sam K. Hui

Statistical tests for the intersection of independent lists of genes: sensitivity, FDR, and Type I error control
[Supplementary Material] [Article]
Loki Natarajan, Minya Pu, and Karen Messer

Context tree selection and linguistic rhythm retrieval from written texts
[Supplementary Material] [Article]
Antonio Galves, Charlotte Galves, Nancy Lopes Garcia, andFlorencia Leonardi

Investigating International New Product Diffusion Speed: A Semiparametric Approach
[Supplementary Material] [Article]
Brian Hartman, Bani Mallick, and Debabrata Talukdar

A Bayesian Model Averaging Approach for Observational Gene Expression Studies
[Supplementary Material] [Article]
Xi Kathy Zhou, Fei Liu, and Andrew Dannenberg

Modeling Dependent Gene Expression
[Supplementary Material] [Article]
Donatello Telesca, Peter Muller, Giovanni Parmigiani, and Ralph S Freedman

Functional Factor Analysis For Periodic Remote Sensing Data
[Supplementary Material] [Article]
Chong Liu, Surajit Ray, Giles Hooker, and Mark A Friedl

Profile control charts based on nonparametric L-1 regression methods
[Supplementary Material] [Article]
Ying Wei, Zhibiao Zhao, and Dennis K.J. Lin

Gains in Power from Structured Two-Sample Tests of Means on Graphs
[Supplementary Material] [Article]
Laurent Jacob, Pierre Neuvial, and Sandrine Dudoit

Network Inference and Biological Dynamics
[Supplementary Material] [Article]
Chris Oates and Sach Mukherjee

Integrative Model-based clustering of microarray methylation and expression data
[Supplementary Material] [Article]
Matthias Kormaksson, James G. Booth, Maria E. Figueroa, and Ari Melnick

A hierarchical model for association rule mining of sequential events: an approach to automated medical symptom prediction
[Supplementary Material] [Article]
Tyler Harris McCormick, Cynthia Rudin, and David Madigan

Simultaneous SNP Identification in Association Studies with Missing Data
[Supplementary Material] [Article]
Zhen Li, Vikneswaran Gopal, Xiaobo Li, John M. Davis, and George Casella

The Importance of Distinct Modeling Strategies for Gene and Gene-specific Treatment Effects in Hierarchical Models for Microarray Data
[Supplementary Material] [Article]
Steven P. Lund and Dan Nettleton

People born in the Middle East but residing in the Netherlands: invariant population size estimates and the role of active and passive variables
[Supplementary Material] [Article]
Peter van der Heijden, Joe Whittaker, Maarten Cruyff, Bart Bakker, and Rik van der Vliet

The Screening and Ranking Algorithm to Detect DNA Copy Number Variations
[Supplementary Material] [Article]
Yue S. Niu and Heping Zhang

Matching markers and unlabelled configurations in protein gels
[Supplementary Material] [Article]
Kanti Mardia, Emma Petty, and Charles Taylor

Finding a Consensus on Credible Features Among Several Paleoclimate Reconstructions
[Supplementary Material] [Article]
Panu Erästö, Lasse Holmström, Atte Korhola, and Jan Weckström

Classification in postural style
[Supplementary Material] [Article]
Antoine Chambaz and Denis Christophe

A Model for Sequential Evolution of Ligands by Exponential Enrichment (selex) data
[Supplementary Material] [Article]
Juli Kirstin Atherton, Nathan Boley, Ben Brown, Nubuo Ogawa, Stuart Davidson, Mike Eisen, Mark Biggin, Peter Bickel

Tree-Guided Group Lasso for Multi-Task Regression with Structured Sparsity, with applications in Quantitative Trait Locus Mapping
[Supplementary Material] [Article]
Seyoung Kim and Eric Xing

Statistical Methods for Analyzing Tissue Microarray Images -- Algorithmic Scoring and Co-training
[Supplementary Material] [Article]
Donghui Yan, Pei Wang, Beatrice S Knudsen, Michael Linden, and Timothy W Randolph

Semiparametric Regression in Testicular Germ Cell Data
[Supplementary Material] [Article]
Anastasia Voulgaraki, Benjamin Kedem, and Barry Graubard

Functional Dynamic Factor Models with Application to Yield Curve Forecasting
[Supplementary Material] [Article]
Spencer Hays, Haipeng Shen, and Jianhua Z. Huang

Addressing Missing Data Mechanism Uncertainty using Multiple-Model Multiple Imputation: Application to a Longitudinal Clinical Trial.
[Supplementary Material] [Article]
Juned Siddique, Ofer Harel, and Catherine Crespi

Phenotypic evolution studied by layered stochastic differential equations
[Supplementary Material] [Article]
Trond Reitan

Tree-structured Models for Difference and Change Detection in a Complex Environment
[Supplementary Material] [Article]
Yong Wang, Ilze Ziedins, Mark Holmes, and Neil Challands

Assessing Transient Carryover Effects in Recurrent Event Processes, with Application to Chronic Health Conditions
[Supplementary Material] [Article]
Candemir Cigsar and Jerald F. Lawless

Truth and memory: Linking instantaneous and retrospective self-reported cigarette consumption
[Supplementary Material] [Article]
Hao Wang, Saul Shiffman, Sandra Griffith, and Daniel F. Heitjan

A Semiparametric Regression Model for Paired Longitudinal Outcomes with Application in Childhood Blood Pressure Development
[Supplementary Material] [Article]
Hai Liu and Wanzhu Tu

A likelihood-based scoring method for peptide identification using mass spectrometry
[Supplementary Material] [Article]
Qunhua Li, Jimmy K. Eng, and Matthew Stephens

Evaluating stationarity via change-point alternatives with applications to fMRI data
[Supplementary Material] [Article]
John A D Aston and Claudia Kirch

Local Tests for Identifying Anisotropic Diffusion Areas in Human Brain with DTI
[Supplementary Material] [Article]
Tao Yu, Chunming Zhang, Andrew L. Alexander, and Richard J. Davidson

Variance Function Estimation in Quantitative Mass Spectrometry with Application to iTRAQ Labeling
[Supplementary Material] [Article]
Micha Mandel, Manor Askenazi, Yi Zhang, and Jarrod Marto

Inference for population dynamics in the Neolithic period
[Supplementary Material] [Article]
Andrew W. Baggaley, Richard J. Boys, Andrew Golightly, Graeme R. Sarson, and Anvar Shukurov

Clustering for Multivariate Continuous and Discrete Longitudinal Data
[Supplementary Material] [Article]
Arnošt Komárek and Lenka Komárková

Incorporating External Information in Analyses of Clinical Trials with Binary Outcomes
[Supplementary Material] [Article]
Minge Xie, Regina Y. Liu, C.V. Damaraju, and William H. Olson

Efficient Computation with a Linear Mixed Model on Large-scale Data Sets with Applications to Genetic Studies
[Supplementary Material] [Article]
Matti Pirinen, Peter Donnelly, and Chris Spencer

Toxicity Profiling of Engineered Nanomaterials via Multivariate Dose Response Surface Modeling
[Supplementary Material] [Article]
Trina R Patel, Donatello Telesca, Saji George, and Andre Nel

Agnostic Notes on Regression Adjustments to Experimental Data: Reexamining Freedman's Critique
[Supplementary Material] [Article]
Winston Lin

Geostatistical modeling in the presence of interaction between the measuring instruments, with an application to the estimation of spatial market potentials
[Supplementary Material] [Article]
Francesco Finazzi

Bootstrap Inference for Network Construction With an Application to a Breast Cancer Microarray Study
[Supplementary Material] [Article]
Shuang Li, Li Hsu, Pei Wang, and Jie Peng

Dynamical functional prediction and classification, with application to traffic flow prediction
[Supplementary Material] [Article]
Jeng-Min Chiou

Joint and Individual Variation Explained (JIVE) for Integrated Analysis of Multiple Datatypes
[Supplementary Material] [Article]
Eric F Lock, Katherine A Hoadley, J S Marron, and Andrew B Nobel

Bayesian Semiparametric Analysis for Two-phase Studies of Gene-environment Interaction
[Supplementary Material] [Article]
Jaeil Ahn, Bhramar Mukherjee, Stephen B. Gruber, and Malay Ghosh

Modeling association between DNA copy number and gene expression with constrained piecewise linear regression splines
[Supplementary Material] [Article]
Gwenaël G. R. Leday, Aad W. van der Vaart, Wessel N. van Wieringen, and Mark A. van de Wiel

Modeling temporal gradients in regionally aggregated California asthma hospitalization data
[Supplementary Material] [Article]
Harrison Quick, Sudipto Banerjee, and Bradley P. Carlin

Hierarchical Bayesian Analysis of Somatic Mutation Data in CancerHierarchical Bayesian Analysis of Somatic Mutation Data in Cancer
[Supplementary Material] [Article]
Jie Ding, Lorenzo Trippa, Xiaogang Zhong, and Giovanni Parmigiani

Visualizing Genetic Constraints
[Supplementary Material] [Article]
Travis L. Gaydos, Nancy E. Heckman, Mark Kirkpatrick, J. R. Stinchcombe, Johanna Schmitt, Joel Kingsolver, and J. S. Marron

Sparse latent factor models with interactions: Analysis of gene expression data
[Supplementary Material] [Article]
Vinicius Diniz Mayrink and Joseph Edward Lucas

Multiscale Adaptive Smoothing Models for the Hemodynamic Response Function in fMRI
[Supplementary Material] [Article]
Hongtu Zhu, Japing Wang, Jianqing Fan, Kelly Giovanello, and Weili Lin

Spatially explicit models for inference about density in unmarked or partially-marked populations
[Supplementary Material] [Article]
Richard Chandler and J. Andrew Royle

The Number of Killings in Rural Norway, 1300-1569
[Supplementary Material] [Article]
Joseph B. Kadane and Ferdinand L. Naeshagen

Testing the isotropy of high energy cosmic rays using spherical needlets
[Supplementary Material] [Article]
Gilles Fa˙, Jacques Delabrouille, Gérard Kerkyacharyan, Dominique Picard

Bayesian alignment of similarity shapes
[Supplementary Material] [Article]
Kanti Mardia, Christopher Fallaize, Stuart Barber, Richard Jackson, and Douglas Theobald

 
   

 
 

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